| Protein ZmCA2P12 | |
|---|---|
|
ZmCA2P12 is a protein in the CCAAT-HAP2 family.
|
|
| Information | |
| TF Name: | ZmCA2P12 |
| Species: | Maize |
| TF Family: | CCAAT-HAP2 |
| Gene Name(Synonym): | CA2P12 |
| Uniprot ID: | C0PEF7 |
| Subgenome: | 2 |
Protein ZmCA2P12
ZmCA2P12 is a protein in the CCAAT-HAP2 family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF02045 | |
| Zm00001eb136080_T001 |  |
| Zm00001eb136080_T002 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d041491 | DAPseq |  |
sequence | fimo | position |
| Zm00001d041491 | DAPseq |  |
sequence | fimo | position |
| Zm00001d041491 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d041491 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmCA2P12 is the regulator
Interactions where ZmCA2P12 is the target
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Zm00001eb136080_T001 from maize genome v5
Amino Acid Sequence
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MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF02045 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CGCCACCACTCTGATGCAGGTCACC...
CGCCACCACTCTGATGCAGGTCACCAGCGATAGGCCCCACCGGCCACCACCCAGCCTCTTCCCCTCCACCCCTGCTCTCAAATTTGAGACCCAAACTATCCCGTCGTCGCCAGTCGCCACGCCGTCGGCCACGCCCCGACGACCAACACCTGCTCCCTCCGCCGCCGCCCGTGTCCTCCCGCTCCGTCCGCGCGCCGCCCTCATACCTCCAAGCGCGGTTGGATCTGCTCTGGGTCCAAGTCCGCTCGATCCTCCTCTCGTCGGAAACTTTATGTGTGCCTTCATCCACGAAGAGCTGAAGATATCACATGACTAGTTGCAGTTAGTGTGGCTTTTCTCCCTGCTTGGTCCTGATTGTGTGCTTTGCCTTGCAAAGGAAGGAATCATGACCTCTGTTGTTCAGAGCGTTTCAGGTGACCACAGGGCTGAGGATCAAAGTCATCAGAAGAAGCAAACTGAACCTGGGGACCAGCAAGAAGCCCCAGTTACTAGTTCAGATAGCCAACCAACAGTGGGCACACCATCAACAGATTATGTGGCACCCTATGCCCCTCATGACATGAGCCATGCAATGGGTCAATATGCTTATCCAAATATTGATCCATACTATGGAAGTCTTTATGCGGCGGCTTATGGTGGACATCCATTGATGCATCCAACATTAGTCGGAATGCATCCGGCTGGCTTACCTTTGCCTACCGATGCAATTGAAGAGCCAGTGTATGTAAATGCAAAGCAATACAATGCCATATTAAGACGGCGTCAATCTCGGGCTAAAGCTGAATCAGAACGGAAGCTTGTCAAGGGCCGCAAGCCCTATCTCCATGAGTCACGGCATCAGCATGCCTTGAAAAGGGCCAGGGGAGCTGGAGGTCGGTTTCTCAATTCGAAGTCAGATGACAAGGAAGAGAACTCCGACTCAAGTCAAAAAGAGATTCAGAACGGAGTTGCGCCCCAAAAGGGTGGCCAACCGTCAACCCCTCCGTCTCCCAACGGTGCGTCGTCAGCTTATCAGGCGCCTAGTCGTGAATGATGATTCGGAACTCACAACTGAAGAGATTTTAGTCCCTGACGCTAGTTGTGGCAGCAGCTTTGTACAGTAAGTGCTAGCGGGCAGCAGCGAAATGGTGTCATAGAAAAACGTTGACGAGTCAGACAGGTTTTGGAGTCTTGGTTTTTTTTCCTCTGTTTATTTTACCTGTCTGCAATTTTAGTAGCTTTGTGTCCCTTCCCCTGGATAGTTTTTTGGTCAGCGCTTAAGAAAGTTTAAGGGCTGATTTGTTGATCGGGGATCCCGAGGGGATCCATGGGAGAAAAATCGTCTTGCTATTCAAAATTGTATTGTAAGGGGATTCCTCGCCTATGGATCCTCTCGAGATCCCTAACCACCAAATCAGCCCTAAGTGTGTAGCATATTGGTCTATTGTTTGCTTTTGCTTTGACTTGGAGATTTGGGAGTGGAGTTCATAACCTTACCG
GRMZM2G104396_T01 from maize genome v3
Amino Acid Sequence
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MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
Nucleotide Sequence
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CGCCACCACTCTGATGCAGGTCACC...
CGCCACCACTCTGATGCAGGTCACCAGCGATAGGCCCCACCGGCCACCACCCAGCCTCTTCCCCTCCACCCCTGCTCTCAAATTTGAGACCCAAACTATCCCGTCGTCGCCAGTCGCCACGCCGTCGGCCACGCCCCGACGACCAACACCTGCTCCCTCCGCCGCCGCCCGTGTCCTCCCGCTCCGTCCGCGCGCCGCCCTCATACCTCCAAGCGCGGTTGGATCTGCTCTGGGTCCAAGTCCGCTCGATCCTCCTCTCGTCGGAAACTTTATGTGTGCCTTCATCCACGAAGAGCTGAAGATATCACATGACTAGTTGCAGTTAGTGTGGCTTTTCTCCCTGCTTGGTCCTGATTGTGTGCTTTGCCTTGCAAAGGAAGGAATCATGACCTCTGTTGTTCAGAGCGTTTCAGGTGACCACAGGGCTGAGGATCAAAGTCATCAGAAGAAGCAAACTGAACCTGGGGACCAGCAAGAAGCCCCAGTTACTAGTTCAGATAGCCAACCAACAGTGGGCACACCATCAACAGATTATGTGGCACCCTATGCCCCTCATGACATGAGCCATGCAATGGGTCAATATGCTTATCCAAATATTGATCCATACTATGGAAGTCTTTATGCGGCGGCTTATGGTGGACATCCATTGATGCATCCAACATTAGTCGGAATGCATCCGGCTGGCTTACCTTTGCCTACCGATGCAATTGAAGAGCCAGTGTATGTAAATGCAAAGCAATACAATGCCATATTAAGACGGCGTCAATCTCGGGCTAAAGCTGAATCAGAACGGAAGCTTGTCAAGGGCCGCAAGCCCTATCTCCATGAGTCACGGCATCAGCATGCCTTGAAAAGGGCCAGGGGAGCTGGAGGTCGGTTTCTCAATTCGAAGTCAGATGACAAGGAAGAGAACTCCGACTCAAGTCAAAAAGAGATTCAGAACGGAGTTGCGCCCCAAAAGGGTGGCCAACCGTCAACCCCTCCGTCTCCCAACGGTGCGTCGTCAGCTTATCAGGCGCCTAGTCGTGAATGATGATTCGGAACTCACAACTGAAGAGATTTTAGTCCCTGACGCTAGTTGTGGCAGCAGCTTTGTACAGTAAGTGCTAGCGGGCAGCAGCGAAATGGTGTCATAGAAAAACGTTGACGAGTCAGACAGGTTTTGGAGTCTTGGTTTTTTTTCCTCTGTTTATTTTACCTGTCTGCAATTTTAGTAGCTTTGTGTCCCTTCCCCTGGATAGTTTTTTGGTCAGCGCTTAAGAAAGTTTAAGGGCTGATTTGTTGATCGGGGATCCCGAGGGGATCCATGGGAGAAAAATCGTCTTGCTATTCAAAATTGTATTGTAAGGGGATTCCTCGCCTATGGATCCTCTCGAGATCCCTAACCACCAAATCAGCCCTAAGTGTGTAGCATATTGGTCTATTGTTTGCTTTTGCTTTGACTTGGAGATTTGGGAGTGGAGTTCATAACCTTACCGGAGATTTGGGAGTTTAATGATGTGTTTGGTTTGTGGAGTC
Zm00001d041491_T001 from maize genome v4
Amino Acid Sequence
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MQVTSDRPHRPPPSLFPSTPALKFETQTIPSSPVATPSATPRRPTPAPSAAARVLPLRPRAALIPPSAVGSALGPSPLDP
PLVGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYAAAYGGH
PLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARGAGGRFL
NSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
Nucleotide Sequence
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GCATCCAGGTCCACGCCACCACTCT...
GCATCCAGGTCCACGCCACCACTCTGATGCAGGTCACCAGCGATAGGCCCCACCGGCCACCACCCAGCCTCTTCCCCTCCACCCCTGCTCTCAAATTTGAGACCCAAACTATCCCGTCGTCGCCAGTCGCCACGCCGTCGGCCACGCCCCGACGACCAACACCTGCTCCCTCCGCCGCCGCCCGTGTCCTCCCGCTCCGTCCGCGCGCCGCCCTCATACCTCCAAGCGCGGTTGGATCTGCTCTGGGTCCAAGTCCGCTCGATCCTCCTCTCGTCGGTGACCACAGGGCTGAGGATCAAAGTCATCAGAAGAAGCAAACTGAACCTGGGGACCAGCAAGAAGCCCCAGTTACTAGTTCAGATAGCCAACCAACAGTGGGCACACCATCAACAGATTATGTGGCACCCTATGCCCCTCATGACATGAGCCATGCAATGGGTCAATATGCTTATCCAAATATTGATCCATACTATGGAAGTCTTTATGCGGCGGCTTATGGTGGACATCCATTGATGCATCCAACATTAGTCGGAATGCATCCGGCTGGCTTACCTTTGCCTACCGATGCAATTGAAGAGCCAGTGTATGTAAATGCAAAGCAATACAATGCCATATTAAGACGGCGTCAATCTCGGGCTAAAGCTGAATCAGAACGGAAGCTTGTCAAGGGCCGCAAGCCCTATCTCCATGAGTCACGGCATCAGCATGCCTTGAAAAGGGCCAGGGGAGCTGGAGGTCGGTTTCTCAATTCGAAGTCAGATGACAAGGAAGAGAACTCCGACTCAAGTCAAAAAGAGATTCAGAACGGAGTTGCGCCCCAAAAGGGTGGCCAACCGTCAACCCCTCCGTCTCCCAACGGTGCGTCGTCAGCTTATCAGGCGCCTAGTCGTGAATGATGATTCGGAACTCACAACTGAAGAGATTTTAGTCCCTGACGCTAGTTGTGGCAGCAGCTTTGTACAGTAAGTGCTAGCGGGCAGCAGCGAAATGGTGTCATAGAAAAACGTTGACGAGTCAGACAGGTTTTGGAGTCTTGGTTTTTTTTCCTCTGTTTATTTTACCTGTCTGCAATTTTAGTAGCTTTGTGTCCCTTCCCCTGGATAGTTTTTTGGTCAGCGCTTAAGAAAGTTTAAGGGCTGATTTGTTGATCGGGGATCCCGAGGGGATCCATGGGAGAAAAATCGTCTTGCTATTCAAAATTGTATTGTAAGGGGATTCCTCGCCTATGGATCCTCTCGAGATCCCTAACCACCAAATCAGCCCTAAGTGTGTAGCATATTGGTCTATTGTTTGCTTTTGCTTTGACTTGGAGATTTGGGAGTGGAGTTCATAACCTTACCGGAGATTTGGGAGTTTAATGATGTGTTTGGTTTGTGGAGTCACT
Zm00001d041491_T002 from maize genome v4
Amino Acid Sequence
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MTSVVQSVSGDHRAEDQSHQKKQTEPGDQQEAPVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA
AAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHESRHQHALKRARG
AGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
Nucleotide Sequence
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GCATCCAGGTCCACGCCACCACTCT...
GCATCCAGGTCCACGCCACCACTCTGATGCAGGTCACCAGCGATAGGCCCCACCGGCCACCACCCAGCCTCTTCCCCTCCACCCCTGCTCTCAAATTTGAGACCCAAACTATCCCGTCGTCGCCAGTCGCCACGCCGTCGGCCACGCCCCGACGACCAACACCTGCTCCCTCCGCCGCCGCCCGTGTCCTCCCGCTCCGTCCGCGCGCCGCCCTCATACCTCCAAGCGCGGTTGGATCTGCTCTGGGTCCAAGTCCGCTCGATCCTCCTCTCGTCGGAAACTTTATGTGTGCCTTCATCCACGAAGAGCTGAAGATATCACATGACTAGTTGCAGTTAGTGTGGCTTTTCTCCCTGCTTGGTCCTGATTGTGTGCTTTGCCTTGCAAAGGAAGGAATCATGACCTCTGTTGTTCAGAGCGTTTCAGGTGACCACAGGGCTGAGGATCAAAGTCATCAGAAGAAGCAAACTGAACCTGGGGACCAGCAAGAAGCCCCAGTTACTAGTTCAGATAGCCAACCAACAGTGGGCACACCATCAACAGATTATGTGGCACCCTATGCCCCTCATGACATGAGCCATGCAATGGGTCAATATGCTTATCCAAATATTGATCCATACTATGGAAGTCTTTATGCGGCGGCTTATGGTGGACATCCATTGATGCATCCAACATTAGTCGGAATGCATCCGGCTGGCTTACCTTTGCCTACCGATGCAATTGAAGAGCCAGTGTATGTAAATGCAAAGCAATACAATGCCATATTAAGACGGCGTCAATCTCGGGCTAAAGCTGAATCAGAACGGAAGCTTGTCAAGGGCCGCAAGCCCTATCTCCATGAGTCACGGCATCAGCATGCCTTGAAAAGGGCCAGGGGAGCTGGAGGTCGGTTTCTCAATTCGAAGTCAGATGACAAGGAAGAGAACTCCGACTCAAGTCAAAAAGAGATTCAGAACGGAGTTGCGCCCCAAAAGGGTGGCCAACCGTCAACCCCTCCGTCTCCCAACGGTGCGTCGTCAGCTTATCAGGCGCCTAGTCGTGAATGATGATTCGGAACTCACAACTGAAGAGATTTTAGTCCCTGACGCTAGTTGTGGCAGCAGCTTTGTACAGTAAGTGCTAGCGGGCAGCAGCGAAATGGTGTCATAGAAAAACGTTGACGAGTCAGACAGGTTTTGGAGTCTTGGTTTTTTTTCCTCTGTTTATTTTACCTGTCTGCAATTTTAGTAGCTTTGTGTCCCTTCCCCTGGATAGTTTTTTGGTCAGCGCTTAAGAAAGTTTAAGGGCTGATTTGTTGATCGGGGATCCCGAGGGGATCCATGGGAGAAAAATCGTCTTGCTATTCAAAATTGTATTGTAAGGGGATTCCTCGCCTATGGATCCTCTCGAGATCCCTAACCACCAAATCAGCCCTAAGTGTGTAGCATATTGGTCTATTGTTTGCTTTTGCTTTGACTTGGAGATTTGGGAGTGGAGTTCATAACCTTACCGGAGATTTGGGAGTTTAATGATGTGTTTGGTTTGTGGAG
Zm00001eb136080_T002 from maize genome v5
Amino Acid Sequence
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MSHAMGQYAYPNIDPYYGSLYAAAYGGHPLMHPTLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKL
VKGRKPYLHESRHQHALKRARGAGGRFLNSKSDDKEENSDSSQKEIQNGVAPQKGGQPSTPPSPNGASSAYQAPSRE
Nucleotide Sequence
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ATCCCGTCGTCGCCAGTCGCCACGC...
ATCCCGTCGTCGCCAGTCGCCACGCCGTCGGCCACGCCCCGACGACCAACACCTGCTCCCTCCGCCGCCGCCCGTGTCCTCCCGCTCCGTCCGCGCGCCGCCCTCATACCTCCAAGCGCGGTTGGATCTGCTCTGGGTCCAAGTCCGCTCGATCCTCCTCTCGTCGGAAACTTTATGTGTGCCTTCATCCACGAAGAGCTGAAGATATCACATGACTAGTTGCAGTTAGTGTGGCTTTTCTCCCTGCTTGGTCCTGATTGTGTGCTTTGCCTTGCAAAGGAAGGAATCATGACCTCTGTTGTTCAGAGCGTTTCAGGGCTGAGGATCAAAGTCATCAGAAGAAGCAAACTGAACCTGGGGACCAGCAAGAAGCCCCAGTTACTAGTTCAGATAGCCAACCAACAGTGGGCACACCATCAACAGATTATGTGGCACCCTATGCCCCTCATGACATGAGCCATGCAATGGGTCAATATGCTTATCCAAATATTGATCCATACTATGGAAGTCTTTATGCGGCGGCTTATGGTGGACATCCATTGATGCATCCAACATTAGTCGGAATGCATCCGGCTGGCTTACCTTTGCCTACCGATGCAATTGAAGAGCCAGTGTATGTAAATGCAAAGCAATACAATGCCATATTAAGACGGCGTCAATCTCGGGCTAAAGCTGAATCAGAACGGAAGCTTGTCAAGGGCCGCAAGCCCTATCTCCATGAGTCACGGCATCAGCATGCCTTGAAAAGGGCCAGGGGAGCTGGAGGTCGGTTTCTCAATTCGAAGTCAGATGACAAGGAAGAGAACTCCGACTCAAGTCAAAAAGAGATTCAGAACGGAGTTGCGCCCCAAAAGGGTGGCCAACCGTCAACCCCTCCGTCTCCCAACGGTGCGTCGTCAGCTTATCAGGCGCCTAGTCGTGAATGATGATTCGGAACTCACAACTGAAGAGATTTTAGTCCCTGACGCTAGTTGTGGCAGCAGCTTTGTACAGTAAGTGCTAGCGGGCAGCAGCGAAATGGTGTCATAGAAAAACGTTGACGAGTCAGACAGGTTTTGGAGTCTTGGTTTTTTTTCCTCTGTTTATTTTACCTGTCTGCAATTTTAGTAGCTTTGTGTCCCTTCCCCTGGA
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